富集GO term BP,CC,MF三合一柱状图
简介
利用柱状图,将GO term的三个类别画在一起,并用框线分割表示。获得该数据的方式:使用
GO/Pathway富集分析或者
metascape提交基因,计算富集,得到结果后进行绘图
数据说明
三列,第一列是GO term,第二列是分类(此列的文字及顺序必需为Biological process,Cellular component,Molecular function),第三列是数值,可以是基因数,也可以是-log10(p)值等有意义的值,此列必需是正值,不能直接用p或者负的)
快速调整技巧:固定旋转角度,调整左侧位置。
论文例子
The anti-inflammatory mechanism of the medicinal fungus puffball analysis based on network pharmacology
论文写作
GO function analysis histogram. BP is marked by dark cyan, CC is marked by sienna and MF is marked by steel blue.
如何引用?
建议直接写网址。4600+篇
google学术,3900+篇
知网学术
正式引用:Tang D, Chen M, Huang X, Zhang G, Zeng L, Zhang G, Wu S, Wang Y.
SRplot: A free online platform for data visualization and graphing. PLoS One. 2023 Nov 9;18(11):e0294236. doi: 10.1371/journal.pone.0294236. PMID: 37943830.
方法章节:Heatmap was plotted by https://www.bioinformatics.com.cn (last accessed on 10 Dec 2024), an online platform for data analysis and visualization.
致谢章节:We thank Mingjie Chen (Shanghai NewCore Biotechnology Co., Ltd.) for providing data analysis and visualization support.