Mutation MAF summary plot

Introduction
Mutation Annotation Format (MAF) is a TCGA defined file format, used to store mutation annotation informations.
MAF is a specific file format for human species, it contains SNV and annotation informations for all samples, easily for downstream analysis. You can change VCF file into MAF file with vcf2maf. Here we used Masked Somatic Mutation, open access mutation annotation files. ref: maftool R package.
Input data
build-in TCGA 33 types of cancers (TCGA.*.mutect*somatic.maf.gz)
Examples from paper
M 5 C regulator-mediated methylation modification patterns and tumor microenvironment infiltration characterization in lung adenocarcinoma. Fig2A

Input	select cancer types and input genes
Output

1) How to plot?
1, Prepare data
2, Open with excel, and change into the same format as the example
3, Copy and paste data into the input frame
4, Select parameters
5, Submit and download figure files

2) Why NO figure generated?
Script need strigent input format, please read the instructions and examples carefully.

3) How to cite?
2000+ papers in (Google Scholar)
Tang D, Chen M, Huang X, Zhang G, Zeng L, Zhang G, Wu S, Wang Y. SRplot: A free online platform for data visualization and graphing. PLoS One. 2023 Nov 9;18(11):e0294236. doi: 10.1371/journal.pone.0294236. PMID: 37943830.

4) FAQs